PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006260.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SRS

Protein Properties

Length: 360aa MW: 40516.4 Da PI: 8.7891

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006260.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	23.7	1.4e-07	38	73	5	40
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvk 40 + +C CGn a+ C ++ C+ CC C+ hv Oeu006260.1 38 KPKCIKCGNVARSRCPYQSCKNCCAKAQNPCHIHVL 73 568*******************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAASSPVKSN SSAAASDGMV LPQSSGINAS RNLRGLNKPK CIKCGNVARS RCPYQSCKNC 60 CAKAQNPCHI HVLKGNSSFP DKSPSSSSPI FDQQSTEASH SGNSHRLRQL SSNFAQFNNL 120 LTPLRSRKPL TRKDAQVINE WRFLKMKEFK DRNIEAEHES FDRYLENVHL LEEVFSVNTP 180 HDEQSASLSA AENFEKMVQG LKLKLRSNPV RTENLRKRIQ YIVDQGLKKL RKYEQNDDAS 240 EISDPEEAGR MSKKIKSSQA ERALALSDLI DKLNKAQSDE DLKACREMAS QLFNWHSKKH 300 QMEQSDPEKS KEQNPENNLS PKRQSIDSPS KRVSSATIDQ EVLCQIDAHF SSLEEREDL*

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAASSPVKSN SSAAASDGMV LPQSSGINAS RNLRGLNKPK CIKCGNVARS RCPYQSCKNC  60
CAKAQNPCHI HVLKGNSSFP DKSPSSSSPI FDQQSTEASH SGNSHRLRQL SSNFAQFNNL  120
LTPLRSRKPL TRKDAQVINE WRFLKMKEFK DRNIEAEHES FDRYLENVHL LEEVFSVNTP  180
HDEQSASLSA AENFEKMVQG LKLKLRSNPV RTENLRKRIQ YIVDQGLKKL RKYEQNDDAS  240
EISDPEEAGR MSKKIKSSQA ERALALSDLI DKLNKAQSDE DLKACREMAS QLFNWHSKKH  300
QMEQSDPEKS KEQNPENNLS PKRQSIDSPS KRVSSATIDQ EVLCQIDAHF SSLEEREDL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	5e-88	SRS family protein