PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004203.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 308aa    MW: 35887.2 Da    PI: 8.4488
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004203.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.45.5e-34121042103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Flkk++e+++d++++ +isw +  nsfvv+d+++f+++ Lpk Fkh+nf+SFvRQLn+Y F+k+++++         weF+++ F+kgkk+ll +ik
   Oeu004203.1  12 FLKKTFEMVDDPATDAIISWGSMRNSFVVWDPHKFSTDFLPKNFKHNNFSSFVRQLNTYRFRKIHSDR---------WEFANEGFQKGKKHLLMHIK 99 
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r++++
   Oeu004203.1 100 RREKT 104
                   **976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEGLREMGPS PFLKKTFEMV DDPATDAIIS WGSMRNSFVV WDPHKFSTDF LPKNFKHNNF  60
SSFVRQLNTY RFRKIHSDRW EFANEGFQKG KKHLLMHIKR REKTSQIMPR HGSAQSWLTV  120
TKNGAEAELE KLRTDQNVLN AEILKLRRQQ EKMEHCLVTV KDRLQDTEMK QKHTVVFMIK  180
ALKNPGFLQY FIEKMRKKRA LTSGEILKKR RLATPDLGNV QEELTTIQSE IQTLYSFDES  240
NSSDLSSESF VAWEKLMEDD LIYDTEEAEE EVERQQLNMV MELEGLLAKP LEWGMHKKGL  300
VVPVSTA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196211RKKRALTSGEILKKRR
2197212RKKRALTSGEILKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.16e-79HSF family protein