PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004144.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 395aa MW: 41242.1 Da PI: 7.2897

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004144.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.6	3.3e-36	106	211	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..........eaesssssasnsssg. 88 a+ k+++ ++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++ ++++ + Oeu004144.1 106 APPKRSSRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsvngtlkiptTPST----------As 193 7889************************************************************8888844421111111111111..........11 PP TCP 89 ...kaaksaakskksqks 103 + a + a +++++++ Oeu004144.1 194 tspETAGDGARKRRKRAQ 211 111111111122222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MASIHRNHHS QPQHHHHHHS PPHIERQEHD EVITLPSDPL LGEPHEYTIT AFGPPPDAAE 60 TNPSPPPLPP PSSDIMPLLK EEPADLEGSL AVTPSPPPQT GALVAAPPKR SSRDRHTKVE 120 GRGRRIRMPA ACAARIFQLT RELGHKSDGE TIRWLLERAE PAIIEATGTG TVPAIAVSVN 180 GTLKIPTTPS TASTSPETAG DGARKRRKRA QSSEFYDVAN SSNLAPVAPI APQGLVPLFP 240 SGTFFMIPPT AGAATIAAAG PSNQPQFWAI PATATPVFSI SGRPMSNFVS AMQAGVNMSF 300 STSSTTTTTI NPTAVGGGAA ASSGNTESGE NSGGKISIST TMAPSSSSVT SKTTVATGTQ 360 TLRDFSLEIY DKKELQFMSG SGPGNHEQTP SSKP*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MASIHRNHHS QPQHHHHHHS PPHIERQEHD EVITLPSDPL LGEPHEYTIT AFGPPPDAAE  60
TNPSPPPLPP PSSDIMPLLK EEPADLEGSL AVTPSPPPQT GALVAAPPKR SSRDRHTKVE  120
GRGRRIRMPA ACAARIFQLT RELGHKSDGE TIRWLLERAE PAIIEATGTG TVPAIAVSVN  180
GTLKIPTTPS TASTSPETAG DGARKRRKRA QSSEFYDVAN SSNLAPVAPI APQGLVPLFP  240
SGTFFMIPPT AGAATIAAAG PSNQPQFWAI PATATPVFSI SGRPMSNFVS AMQAGVNMSF  300
STSSTTTTTI NPTAVGGGAA ASSGNTESGE NSGGKISIST TMAPSSSSVT SKTTVATGTQ  360
TLRDFSLEIY DKKELQFMSG SGPGNHEQTP SSKP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	211	ARKRRKRAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	9e-53	TCP family protein