PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88065.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CAMTA

Protein Properties

Length: 892aa MW: 100948 Da PI: 7.3922

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164.7	1.5e-51	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e k+rwl+++ei+aiL n++++++ ++ t p+sg+l+L++rk++r+fr+DG+swkkkkdgktv+E+he+LKvg+ e +++yYah+++nptf rrcyw OWM88065.1 30 EEaKTRWLRPNEIHAILCNYKNFTVNVKPVTIPPSGTLVLFDRKMLRNFRRDGHSWKKKKDGKTVKEAHEHLKVGTDERIHVYYAHGQDNPTFVRRCYW 128 4559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 lL+++le+ivlvhy+e++ OWM88065.1 129 LLDKKLEHIVLVHYRETQ 146 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MEGGAPGQLV GSEIHGFHTL QDLDVANIME EAKTRWLRPN EIHAILCNYK NFTVNVKPVT 60 IPPSGTLVLF DRKMLRNFRR DGHSWKKKKD GKTVKEAHEH LKVGTDERIH VYYAHGQDNP 120 TFVRRCYWLL DKKLEHIVLV HYRETQEFQN SPATPGNSNS STISDPSAPW VPSEEHDSGT 180 NQALHAKERE LTEPNENITV KAHELRLHEL NTLEWDELVT DDPSAQVPEG GSFLGQQNIA 240 EPRSISNDNA PNGACSLGNV DGPITAMGVQ VNSDYLSNNF SNLGTGNFGD FLQTDGLQRH 300 DSFGRWMNYI MIDSPDSANG AVTKPSLSCA MGSQPSSVPE LVFPITDIAP AWAFSTEKTK 360 IIITGFFIEG HQQHPKANLF CICGDNCVPV EIIQVGVYRC LVPPHSPGIV NLCMSFDGHK 420 PVSQFVNFEY RAPPLVHDVE PSIEEKPKCE ELQLQMRLAF LLFSTSKCLD ITACNITPTI 480 REDAKKFSLH TASILKDWAY FLSLVEENKL SPVQAKDGIF ELMLKNRLKD WILERTITGC 540 KTTEYDLHGQ GVIHLCAILG YTWAVQLFSW SGLSLDFRDK SGWTALHWAA YCGREKMVAK 600 LLSAGAKANL VTDPTSNNPA GCTAADLASQ RGYEGLSAYL AEKSLVHHFQ DMSLAGNISG 660 SLQTTSDYTS NTEGNLSQED VCLKDSLAAY RTAADAAARI QAAFREHSFK IRSNQVMCFN 720 SEEEARNIVA AMKIQQAFRN FECKKKMAAA AQIQYRFRTW KMRREFLNLR NKAIKIQAAF 780 RGFQVRRQYR KVVWSVGILE KAILRWRLKR KGFRGFHVKE NVDWRQDSDT EEDFFRTSRK 840 QAEDRLERSV VRVQAMFRSK KAQEDYRRMK LTHDEAQLEY DKEHNGHCDM ER

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MEGGAPGQLV GSEIHGFHTL QDLDVANIME EAKTRWLRPN EIHAILCNYK NFTVNVKPVT  60
IPPSGTLVLF DRKMLRNFRR DGHSWKKKKD GKTVKEAHEH LKVGTDERIH VYYAHGQDNP  120
TFVRRCYWLL DKKLEHIVLV HYRETQEFQN SPATPGNSNS STISDPSAPW VPSEEHDSGT  180
NQALHAKERE LTEPNENITV KAHELRLHEL NTLEWDELVT DDPSAQVPEG GSFLGQQNIA  240
EPRSISNDNA PNGACSLGNV DGPITAMGVQ VNSDYLSNNF SNLGTGNFGD FLQTDGLQRH  300
DSFGRWMNYI MIDSPDSANG AVTKPSLSCA MGSQPSSVPE LVFPITDIAP AWAFSTEKTK  360
IIITGFFIEG HQQHPKANLF CICGDNCVPV EIIQVGVYRC LVPPHSPGIV NLCMSFDGHK  420
PVSQFVNFEY RAPPLVHDVE PSIEEKPKCE ELQLQMRLAF LLFSTSKCLD ITACNITPTI  480
REDAKKFSLH TASILKDWAY FLSLVEENKL SPVQAKDGIF ELMLKNRLKD WILERTITGC  540
KTTEYDLHGQ GVIHLCAILG YTWAVQLFSW SGLSLDFRDK SGWTALHWAA YCGREKMVAK  600
LLSAGAKANL VTDPTSNNPA GCTAADLASQ RGYEGLSAYL AEKSLVHHFQ DMSLAGNISG  660
SLQTTSDYTS NTEGNLSQED VCLKDSLAAY RTAADAAARI QAAFREHSFK IRSNQVMCFN  720
SEEEARNIVA AMKIQQAFRN FECKKKMAAA AQIQYRFRTW KMRREFLNLR NKAIKIQAAF  780
RGFQVRRQYR KVVWSVGILE KAILRWRLKR KGFRGFHVKE NVDWRQDSDT EEDFFRTSRK  840
QAEDRLERSV VRVQAMFRSK KAQEDYRRMK LTHDEAQLEY DKEHNGHCDM ER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein