PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85196.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 1074aa MW: 118603 Da PI: 5.4603

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.5	6.5e-29	670	721	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI RWP+Rki+++ OWM85196.1 670 AEKQISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGITRWPSRKINKV 721 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1074 aa Download sequence
MQMESHSPSP PSSPITVLPP PSAFPPPSSS ASCYFLLSLS PFCSPQPISC PFFFFFSFSF 60 LFLLVHSGFP GNFLSLDAMP DIDDDRPRAS PGRESVMDLD LDLDGSWPMD QISFLAANPM 120 SPFLMSSTEQ PCSPLWAFSD GLDDKLPSSA AAAVNGGFRL SDYPRLLTCA PNLENESVAE 180 NDETRKHPSP FLGLAPLENP DNYCIIKERM TQALRYLKES TEQHVLAQVW APVKNGGRYV 240 LTTLGQPFVL DPNTNGLHQY RMVSLMYIFS VDSDNDGELG LPGRVFRQKL PEWTPNVQYY 300 SRKEYSRLNH ALHCDVRGTL ALPVFEPSGQ SCVGVLELIM TSQKINYAPE VDKVCKALEA 360 VNLKSSEILD HSNTQVGSII QICNEGRHVA LVEILEILTV LCETHKLPLA QTWVPCRHRS 420 VLADGGGLKK SCSSFDGSCM GQVCMSTTDV AYYVVDAQIW GFREACAEHH LQKGQGVAGR 480 AFLSRSSCFC KDITKFCKTE YPLVHYARMF GITSCFAICL RSSFTGNDEY ILEFFLPPNI 540 VDSYEQEILL RSLMGTMKQH FKSLRVGSGK ELEQEEKSIE IIQASSLNER NETNIVLEPL 600 QVPDGGAELA TSRLQYNLPS IRREVDQVNV PNDVTVDNAE KIVEVVNENP VPCSDNKKQA 660 KKSEKKRGKA EKQISLDVLQ QYFAGSLKDA AKSLGVCPTT MKRICRQHGI TRWPSRKINK 720 VNRSLSKLKR VIESVQGADE AFGLGSLAAT SPLPVAVGSI SWPSSLKGSN EPNQIEQKEK 780 PSELLNEKVI KSPSPRTPGS DEDPAIENWL GGRILSQEQL IYEQNGAGGM SELYKGLNRP 840 RNGTGSREES CGTPTSHGSC QGSPINEGLG FVSSPPKEQP SDPCQRLRAS PDLPFTKPTE 900 ELNFSACSVI PNSLLPTEAQ ETFERMLLED AGSSKDLRNL CPSGADTVLE DSSSKQHVGL 960 RPPFRAVTAQ GPARQDMKSI TIKATYREDI IRFRISFSSK VVELKEEVAK RLKLEVGTFD 1020 VKYLDDDHEW VLIACNADWQ ECVDISRSSG CNMIRLLVHD VMANLGSSCE SSGE

Sequence ? help Back to Top

Protein Sequence Length: 1074 aa Download sequence

MQMESHSPSP PSSPITVLPP PSAFPPPSSS ASCYFLLSLS PFCSPQPISC PFFFFFSFSF  60
LFLLVHSGFP GNFLSLDAMP DIDDDRPRAS PGRESVMDLD LDLDGSWPMD QISFLAANPM  120
SPFLMSSTEQ PCSPLWAFSD GLDDKLPSSA AAAVNGGFRL SDYPRLLTCA PNLENESVAE  180
NDETRKHPSP FLGLAPLENP DNYCIIKERM TQALRYLKES TEQHVLAQVW APVKNGGRYV  240
LTTLGQPFVL DPNTNGLHQY RMVSLMYIFS VDSDNDGELG LPGRVFRQKL PEWTPNVQYY  300
SRKEYSRLNH ALHCDVRGTL ALPVFEPSGQ SCVGVLELIM TSQKINYAPE VDKVCKALEA  360
VNLKSSEILD HSNTQVGSII QICNEGRHVA LVEILEILTV LCETHKLPLA QTWVPCRHRS  420
VLADGGGLKK SCSSFDGSCM GQVCMSTTDV AYYVVDAQIW GFREACAEHH LQKGQGVAGR  480
AFLSRSSCFC KDITKFCKTE YPLVHYARMF GITSCFAICL RSSFTGNDEY ILEFFLPPNI  540
VDSYEQEILL RSLMGTMKQH FKSLRVGSGK ELEQEEKSIE IIQASSLNER NETNIVLEPL  600
QVPDGGAELA TSRLQYNLPS IRREVDQVNV PNDVTVDNAE KIVEVVNENP VPCSDNKKQA  660
KKSEKKRGKA EKQISLDVLQ QYFAGSLKDA AKSLGVCPTT MKRICRQHGI TRWPSRKINK  720
VNRSLSKLKR VIESVQGADE AFGLGSLAAT SPLPVAVGSI SWPSSLKGSN EPNQIEQKEK  780
PSELLNEKVI KSPSPRTPGS DEDPAIENWL GGRILSQEQL IYEQNGAGGM SELYKGLNRP  840
RNGTGSREES CGTPTSHGSC QGSPINEGLG FVSSPPKEQP SDPCQRLRAS PDLPFTKPTE  900
ELNFSACSVI PNSLLPTEAQ ETFERMLLED AGSSKDLRNL CPSGADTVLE DSSSKQHVGL  960
RPPFRAVTAQ GPARQDMKSI TIKATYREDI IRFRISFSSK VVELKEEVAK RLKLEVGTFD  1020
VKYLDDDHEW VLIACNADWQ ECVDISRSSG CNMIRLLVHD VMANLGSSCE SSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein