PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM83401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 603aa MW: 64875 Da PI: 6.7969 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.2 | 1.1e-30 | 348 | 406 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ OWM83401.1 348 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 406 7*********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 603 aa Download sequence |
MDRGWGLTLD SDSLRFFSPA TATSNTPTVA AHRPPSGFLK LLGHTRPADV ALPMFFSAAH 60 QPHLGHRPSF DEERLSRDTA SAVSPPSPPG ENRAVAVGEV DFFSAESKKQ SPRPADEPSA 120 VVKKEIGSEA NMDVNTGLRL LTANNGSDDS MVDDGIGFSV DVENKRAKNE LVQLQGELQR 180 MNAENQKLKE MLSQVSTNYS TLQMHLAAMI HQQQQSHGAE TRQEHEVDEA KSVERKRDQE 240 LVPRQFLDLV PSKTADNEEV WNSSSEERTR NGSKSPGHNM ELASSGHITD QEHGNSTRPE 300 SPDSETQGWV PNKAPKLDVP KAIDQSAEAT MRKARVSVRA RSEAPMITDG CQWRKYGQKM 360 AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTTA 420 AVSMLLSGSM SSSDGAMMNP NLLARAILPC SSSMATISAS APFPTVTLDL THSPNPNLPL 480 QRPQPHQFQI PPQNFPSGQA LPQVFGQALY NQSKFSGLQL SQDTAPNSQS SHQGQASLAD 540 TVNAATAAIT ADPNFTAALA AAISSIIGGG SHPNNGSNNN NNNGNATTSN SNNSNKMNGF 600 LGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-134 | WRKY family protein |