PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82437.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 329aa MW: 36365.2 Da PI: 6.7278

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + +++ g++R++k+c++rw++yl OWM82437.1 14 KGPWSPEEDAKLKDYIEKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	35	3.3e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ OWM82437.1 69 GEFSDVEDRIICTLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 7899***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDVEDRIIC TLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGN 120 FYINPPGHSN LSCGMPLAPE QRQHFIDPFS PTIPTLSVPS SSTSDFYELS PFNSSSSSSA 180 ATNLQSRETL VGPINMYGHE AASCSSSDGS SVDKDNHHPR FDHHQQVPNN NLQGFSPSHY 240 GNEILGPGDQ DMINYGSNSA PLDYYGSIEE IKQLISNTSS SLTTATTNHN NNDCNYSGFL 300 FDVENRSSSP ESVAANVPTR ADEGVLYYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-77	MYB family protein