PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 22471.3 Da PI: 10.114 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 55 | 104 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng +r++lg+f t eeAa a+++a+ + +g OWM71674.1 55 YRGVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFNTGEEAALAYDQAAFAVRG 104 9*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MNSYYSSFNS SDFFSINQYH PFTGNHPITS TPGPLRPNYK FEVSGNSVHK EEVYYRGVRK 60 RPWGKYAAEI RDSTRNGARV WLGTFNTGEE AALAYDQAAF AVRGSAAVLN FPAEVVQRSL 120 VAEDMRSVGI EGGTWEGHSP VLALKKKHYM KRKAESRKRR ESESRLKAAK VKKNVVVLED 180 LGAAFLEEIL RISENPNPW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 160 | KKKHYMKRKAESRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 6e-44 | ERF family protein |