PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM69201.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 364aa MW: 40754.1 Da PI: 7.6336

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM69201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.5e-05	191	210	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ OWM69201.1 191 FSCPLCFKTFNRYNNMQMHM 210 89*****************9 PP
2	zf-C2H2	14.9	7.9e-05	275	297	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ OWM69201.1 275 FSCRKCGKAFAVRGDWRTHEKNC 297 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MTDPYCYSSS SNYLINDAYW INFNHHHFSS SPSSSSSSGQ YAYSLHGHNF HNNNITAAST 60 TPFTNFNTNN DFTPSPPPPP PPSSPPLKEA LPLLSLSPTR HDDDRKREGQ VPMEVDDNDD 120 EDGAQVTVAL HLGLPSPSST SSPSHCRYGN SISNNSVEAA SDKEDHSSNR LNKGQYWIPT 180 PAQILIGPTQ FSCPLCFKTF NRYNNMQMHM WGHGSQYRRG PESLRGTQPT AMLRLPCYCC 240 APGCKNNIDH PRARPLKDFR TLQTHYKRKH GIKPFSCRKC GKAFAVRGDW RTHEKNCGRL 300 WYCSCGSDFK HKRSLKDHIR AFGSGHKAIG IDDAECCLFE EDEPASEIDQ QDINCCNCES 360 ASSK

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MTDPYCYSSS SNYLINDAYW INFNHHHFSS SPSSSSSSGQ YAYSLHGHNF HNNNITAAST  60
TPFTNFNTNN DFTPSPPPPP PPSSPPLKEA LPLLSLSPTR HDDDRKREGQ VPMEVDDNDD  120
EDGAQVTVAL HLGLPSPSST SSPSHCRYGN SISNNSVEAA SDKEDHSSNR LNKGQYWIPT  180
PAQILIGPTQ FSCPLCFKTF NRYNNMQMHM WGHGSQYRRG PESLRGTQPT AMLRLPCYCC  240
APGCKNNIDH PRARPLKDFR TLQTHYKRKH GIKPFSCRKC GKAFAVRGDW RTHEKNCGRL  300
WYCSCGSDFK HKRSLKDHIR AFGSGHKAIG IDDAECCLFE EDEPASEIDQ QDINCCNCES  360
ASSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-121	C2H2 family protein