PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM68323.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 291aa MW: 32664 Da PI: 5.4003

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM68323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.6	1.6e-21	100	160	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ OWM68323.1 100 RQRWTPTPVQLQILERIFNQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 160 89***************99************************************97 PP
2	Wus_type_Homeobox	101.7	5.1e-33	99	162	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq OWM68323.1 99 ARQRWTPTPVQLQILERIFNQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 162 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MMEWEKQQQQ QQQVGEGGQH GDGAAGVGVA GGANGVPYVK VMTDEQLETL RKQIAIYASI 60 CEQLVEMHKT LTAQQDLAGV RLGNLYCDSL VNSGHKITAR QRWTPTPVQL QILERIFNQG 120 NGTPSKQKIK EITSELSQHG QISETNVYNW FQNRRARSKR KQQNSAPNNA ESEADTEVES 180 RSPKEEKTNS EMFQSQQNQA PRAEDLCFQS PEISSELHFV DSQTTKVESM FPSDGSLRPG 240 TRNFGQMPFY DGILSNPGNE HFNGKMEIPG GYNLYQHPED FQHPEDYGRT G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	6e-91	WOX family protein