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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OWM64116.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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| Family | NAC | ||||||||
| Protein Properties | Length: 335aa MW: 37774.9 Da PI: 4.8893 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 168.2 | 2.7e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97
lppGfrFhPtdeel+ +yLk+kveg ++el +vi+ +d+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nratksgyWkatgkd+++ + ++
OWM64116.1 6 LPPGFRFHPTDEELIGYYLKRKVEGLEFEL-QVIPIIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDKKYPNGSRTNRATKSGYWKATGKDRKISC-QS 102
79****************************.99**************95344555788**************************************.99 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+ +g +ktLvfy+grap g + dWvmheyrl
OWM64116.1 103 SITGYRKTLVFYRGRAPLGDRMDWVMHEYRL 133
99***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 335 aa Download sequence |
MGGASLPPGF RFHPTDEELI GYYLKRKVEG LEFELQVIPI IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKISC QSSITGYRKT LVFYRGRAPL 120 GDRMDWVMHE YRLSDDLSGP SNPQGAYALC RVIKKNESNA QKRTETEPKG KQGGTSSSNV 180 DHITSMEILN EHSSFSGCLS SQMGSIYDES RYPSPTLPFG NTTPMDECEP ASVENNFSSL 240 WVSPDLILDS SKGYTSQGQD SVPQYFPPQH ELPISSSSSF SNFTGEVEFA DDFGTMGCMS 300 PPYAAPGSYT GYYGDEYFPY EGYDNASSTM YQNPF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17980.1 | 6e-98 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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