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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM63381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | HSF | ||||||||
Protein Properties | Length: 154aa MW: 17225.4 Da PI: 7.9673 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 43 | 1.2e-13 | 74 | 143 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHH............HHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSF............vRQLnmY 60 Fl+k+++i++d+++ ++++ws nsf+v+++++f++++LpkyF n++ F +RQLn+Y OWM63381.1 74 FLTKTFKIVDDPSMGRVVWWSVGRNSFIVWEPHRFSSTLLPKYFCCLNYH-FndllqalqllhfIRQLNTY 143 9********************999********************988876.33556666666669999999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MDGGGRLRTA KQEEQTQALS SSSPHVTPTK SGGCSGSCDG PSSSSSSSWA NQNWDTRDLP 60 RPMEGLSEAG PPPFLTKTFK IVDDPSMGRV VWWSVGRNSF IVWEPHRFSS TLLPKYFCCL 120 NYHFNDLLQA LQLLHFIRQL NTYVSPLYLL SVWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-29 | HSF family protein |