PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA16366.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 172aa MW: 19963.7 Da PI: 9.2387 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 53.9 | 2.3e-17 | 15 | 60 | 2 | 47 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 +i k +r++tfskR++g +KK +ELS+LC+a+ a+++fs+ +k + OVA16366.1 15 KITRKDRREITFSKRKTGHFKKPSELSTLCGAKTAIVVFSPANKPF 60 688899***********************************99855 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEKKTQGRKK IAMEKITRKD RREITFSKRK TGHFKKPSEL STLCGAKTAI VVFSPANKPF 60 SFKHPSVDSV SDQFLASNSP SKVGVSSTIE PSFGDYYRSA NINKFNRQVT EAMNLLEEEE 120 DQGKKLTEIE KDEFKERFLW NSPLEYLQYY ELEQLKVSME ELKTKVYKEG EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 1e-33 | M-type_MADS family protein |