PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16317.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 382aa MW: 43405.9 Da PI: 5.6506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	6	54	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++q+G+g +W + ++++g++R++k+c++rw++yl OVA16317.1 6 KGPWSPEEDAKLKNYIEQHGTGnNWIALPQKIGLKRCGKSCRLRWLNYL 54 79*********************************************97 PP
2	Myb_DNA-binding	36.6	1e-11	61	103	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++++Ed ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ OVA16317.1 61 GGFSEDEDNIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 103 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MPNVKKGPWS PEEDAKLKNY IEQHGTGNNW IALPQKIGLK RCGKSCRLRW LNYLRPNIKH 60 GGFSEDEDNI ICNLYISIGS RWSIIAAQLP GRTDNDIKNY WNTRLKKKLL GRRKDSQSRR 120 LSSLNDQDYS KDSNNIDDNS YSNSLSNSAL ERLQLHMQLQ SLQNPFSFYN NPALWPKLHP 180 LGEKMFQGHH HGLNNSPSPS VQQMPNTTQT GTCQKFKVFD DSPTSLIELE QENSVSKNPN 240 QDELGYSFDG FSPFNVGTDQ LDGNNIINSK LNVVEQSNTN FQSVFGLQAE LNELLNYNKA 300 GGFMENGDQR RSTTTTTTTT TTTEFDCFKE MEGSSKDSMI WWASTDFDTK SSSSNSWDSA 360 SVLQTNDDHQ GMFQDFVLEY DL

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MPNVKKGPWS PEEDAKLKNY IEQHGTGNNW IALPQKIGLK RCGKSCRLRW LNYLRPNIKH  60
GGFSEDEDNI ICNLYISIGS RWSIIAAQLP GRTDNDIKNY WNTRLKKKLL GRRKDSQSRR  120
LSSLNDQDYS KDSNNIDDNS YSNSLSNSAL ERLQLHMQLQ SLQNPFSFYN NPALWPKLHP  180
LGEKMFQGHH HGLNNSPSPS VQQMPNTTQT GTCQKFKVFD DSPTSLIELE QENSVSKNPN  240
QDELGYSFDG FSPFNVGTDQ LDGNNIINSK LNVVEQSNTN FQSVFGLQAE LNELLNYNKA  300
GGFMENGDQR RSTTTTTTTT TTTEFDCFKE MEGSSKDSMI WWASTDFDTK SSSSNSWDSA  360
SVLQTNDDHQ GMFQDFVLEY DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-81	MYB family protein