PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11656.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 192aa    MW: 21459.4 Da    PI: 5.1728
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF756e-24959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ie+ +  q+t+skR ngi+KKA ELS+LC+++vavi+fs+tg+l ++ss
  OVA11656.1  9 KKIEDPTACQTTYSKRMNGIIKKAAELSILCNTDVAVIMFSPTGRLTTFSS 59
                689**********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGRAKLAIKK IEDPTACQTT YSKRMNGIIK KAAELSILCN TDVAVIMFSP TGRLTTFSSN  60
GRVENVFLRF FNVPANLRGG FYMPDPENIK TPQQAELHQR IIINALERLK MRREELEISK  120
NNYAQQAESI KIPSKDSEDA DMISVDSVDC SKLGEKSKKE NVSEPANPEA EEDKMESEAS  180
IVANEGHVDF FA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-29MIKC_MADS family protein