PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10079.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 172aa    MW: 19677.6 Da    PI: 10.5106
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.73.2e-231765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie +  rqvtfskRr+g++KKA+EL++LC+ae a+i+fs+ gk + +
  OVA10079.1 17 KRIEKEDARQVTFSKRRAGLFKKASELCILCGAETAIIVFSPAGKSFSF 65
                79******************************************96655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MVSKRKPSMG RQKIEIKRIE KEDARQVTFS KRRAGLFKKA SELCILCGAE TAIIVFSPAG  60
KSFSFGHQSV ETVVDRFLSG SPQNYVRPTP LNDSHRGASV RDLNKQYTEV LNQLEAEKKR  120
GVELEKMRKA SRNQLWWESP INELGLRELE QLRASMEELK KNVAVTPRFS EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-51M-type_MADS family protein