PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02408.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARR-B

Protein Properties

Length: 590aa MW: 65431.3 Da PI: 6.3834

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.6	1.2e-27	234	288	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kpr++W+ eLH++Fv av+qL G+++A+Pk+ilelm+v+g+++e+v+SHLQkYRl+ OVA02408.1 234 KPRVVWSDELHNQFVAAVNQL-GIDRAVPKKILELMNVPGISRENVASHLQKYRLH 288 79*****************.******************************97 PP
2	Myb_DNA-binding	37.4	5.7e-12	236	286	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ g +++++ s++qky+ OVA02408.1 236 RVVWSDELHNQFVAAVNQLGIDraVPKKILELMNvPGISRENVASHLQKYR 286 678***********************************************7 PP
3	Response_reg	69.2	1.8e-23	55	162	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vd +pl ++ l+++l++ + ev++++++ +al +l+ek+ +D++l+ + +p+m+G+ell++i + +++p+i++++ + + al+ +k Ga OVA02408.1 55 VLVVDNDPLCLQELEKMLQSLLF-EVTTCSSAMDALCKLQEKKykFDMVLTEVHLPHMNGFELLEQISMQLDQIPVIMMSSDERGNVALKGVKKGAC 150 89*******************.***********999999******************77778********************* PP EEEESS--HHHH CS Response_reg 96 dflsKpfdpeel 107 d+l Kp+ + + OVA02408.1 151 DYLIKPIRVQLI 162 ****876654 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MMSNLKGVTS SISSSSRDST KESGSCGGGG GGGGGGSGGG LISNDDEFPP TGLRVLVVDN 60 DPLCLQELEK MLQSLLFEVT TCSSAMDALC KLQEKKYKFD MVLTEVHLPH MNGFELLEQI 120 SMQLDQIPVI MMSSDERGNV ALKGVKKGAC DYLIKPIRVQ LIQNIWQHVV RKRMKELKEL 180 DHSGNIDDSE RHQKSLEDAG YLSSGNERRL KSSKRMKEGE DDTEDRDDTS TVKKPRVVWS 240 DELHNQFVAA VNQLGIDRAV PKKILELMNV PGISRENVAS HLQKYRLHLN KNPSGPNAPF 300 MDREEANLNQ LDLQSLSVTA QHPLHSNIIS DQRNIFIPEV SSSRFGTGQQ QLSNPNKQLM 360 LVNGLPNSMG LQVSEGALGH RNFTARTGLT GHADNFVHGN HNSSLMLRMA QSQYRGHLLN 420 GIASGQQILS NELEGQVLVR NETVVNVRGA AYNPLPQPSP AINLPMSHIV EFPENYGAFD 480 STAGVPGFTS TWMFQDEKNV KLSSFSDELY RNNSVDPKLR NLTYDSSVCD HHSFLTNQKN 540 EQNNDNIKQE NEHGNNPCNI VIFQNNLQVD NSTGINAEMR ANSRCDRDQR

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MMSNLKGVTS SISSSSRDST KESGSCGGGG GGGGGGSGGG LISNDDEFPP TGLRVLVVDN  60
DPLCLQELEK MLQSLLFEVT TCSSAMDALC KLQEKKYKFD MVLTEVHLPH MNGFELLEQI  120
SMQLDQIPVI MMSSDERGNV ALKGVKKGAC DYLIKPIRVQ LIQNIWQHVV RKRMKELKEL  180
DHSGNIDDSE RHQKSLEDAG YLSSGNERRL KSSKRMKEGE DDTEDRDDTS TVKKPRVVWS  240
DELHNQFVAA VNQLGIDRAV PKKILELMNV PGISRENVAS HLQKYRLHLN KNPSGPNAPF  300
MDREEANLNQ LDLQSLSVTA QHPLHSNIIS DQRNIFIPEV SSSRFGTGQQ QLSNPNKQLM  360
LVNGLPNSMG LQVSEGALGH RNFTARTGLT GHADNFVHGN HNSSLMLRMA QSQYRGHLLN  420
GIASGQQILS NELEGQVLVR NETVVNVRGA AYNPLPQPSP AINLPMSHIV EFPENYGAFD  480
STAGVPGFTS TWMFQDEKNV KLSSFSDELY RNNSVDPKLR NLTYDSSVCD HHSFLTNQKN  540
EQNNDNIKQE NEHGNNPCNI VIFQNNLQVD NSTGINAEMR ANSRCDRDQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-88	ARR-B family protein