PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G00250.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 318aa MW: 34451.1 Da PI: 10.2107

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G00250.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.7e-18	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v ++G ++W++I++ ++ gR++k+c++rw + ONIVA09G00250.1 16 KGPWSPEEDEALQRLVGRHGARNWSLISKSIP-GRSGKSCRLRWCNQ 61 79****************************.*********985 PP
2	Myb_DNA-binding	52.7	9.5e-17	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar + gRt++ +k++w++ ONIVA09G00250.1 70 PFTPEEDDTILRAHARFGNK-WATIARLLA-GRTDNAIKNHWNST 112 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MASCRRGGGG DVDRIKGPWS PEEDEALQRL VGRHGARNWS LISKSIPGRS GKSCRLRWCN 60 QLSPQVEHRP FTPEEDDTIL RAHARFGNKW ATIARLLAGR TDNAIKNHWN STLKRKHHSS 120 LLADDLRPLK RTTSDGHPTL SSAAAPGSPS GSDLSDSSHH SLPSHMPSSP PHLLLPQHVY 180 RPVARAGGVV VPPPPPPPPP ATSLSLSLSL PGLDHPHPDP STPSEPAVQL QPPPPSQMPP 240 PTPSCVRQEP PQMPFQLQPP PPPRPSAPFS AEFLAMMQEM IRIEVRNYMS GSAAVDPRSS 300 PDNGVRAASR IMGMAKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	2e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G00250.1