PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G05190.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 436aa MW: 49105.6 Da PI: 7.851

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G05190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158	3.9e-49	6	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee............vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhP+d+elvv+yL k+++ + + ++ +vd++k+ePwdLp+ + + kewyf+ +d+kya+g+r+nrat+ ONIVA02G05190.1 6 LPPGFRFHPRDDELVVDYLSGKLRSGDggaA---SgggaagagcptpTLIDVDLNKCEPWDLPEIACIGGKEWYFYNLKDRKYARGQRTNRATE 96 79********************9996650...23455555666556999********7666789******************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 sgyWkatgkd+e+++ kg+lvg++ktLvfy+grapkge+tdWvmhe+r ONIVA02G05190.1 97 SGYWKATGKDREITR-KGSLVGMRKTLVFYRGRAPKGERTDWVMHEFRQ 144 **********9.999**************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MVEARLPPGF RFHPRDDELV VDYLSGKLRS GDGGAASGGG AAGAGCPTPT LIDVDLNKCE 60 PWDLPEIACI GGKEWYFYNL KDRKYARGQR TNRATESGYW KATGKDREIT RKGSLVGMRK 120 TLVFYRGRAP KGERTDWVMH EFRQELDHAN HHHHLKEGWV LCRVFYKSRT EAVAAPTMES 180 TLPPRYINGG TSRSPLPPLV DSSISFNHGG YEEVLPCFSS SHHQQPSPAS MNASAAADDD 240 QDYHHLSEGQ RHYSDKKLMR DVQNDQVTTR FDGHLAVKRE MSLKKKDLSE DEQAAPNADA 300 GGFSILLKYS VSKMTSLMKS IQRNISTLQE FLNQKKEAIL EKVEIFTKLL LPSRLGSAVF 360 QLCLEHLIKN HKVGISWDGI WELSDWEVAD NEVVLKMVGQ CSAPADSKSK DLKRLFDLLR 420 PYYDQEGKDP CHTLKI

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MVEARLPPGF RFHPRDDELV VDYLSGKLRS GDGGAASGGG AAGAGCPTPT LIDVDLNKCE  60
PWDLPEIACI GGKEWYFYNL KDRKYARGQR TNRATESGYW KATGKDREIT RKGSLVGMRK  120
TLVFYRGRAP KGERTDWVMH EFRQELDHAN HHHHLKEGWV LCRVFYKSRT EAVAAPTMES  180
TLPPRYINGG TSRSPLPPLV DSSISFNHGG YEEVLPCFSS SHHQQPSPAS MNASAAADDD  240
QDYHHLSEGQ RHYSDKKLMR DVQNDQVTTR FDGHLAVKRE MSLKKKDLSE DEQAAPNADA  300
GGFSILLKYS VSKMTSLMKS IQRNISTLQE FLNQKKEAIL EKVEIFTKLL LPSRLGSAVF  360
QLCLEHLIKN HKVGISWDGI WELSDWEVAD NEVVLKMVGQ CSAPADSKSK DLKRLFDLLR  420
PYYDQEGKDP CHTLKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G05190.1