PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO82091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23725.4 Da PI: 4.8811 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.3 | 4.4e-14 | 35 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr k++g+Wv+e+r+ps+ + r++lg+f ++ +Aa+a +aa+++l+g OMO82091 35 PVYKGVR--KRNGKWVSELREPSK---QSRIWLGTFSSPRKAARADDAAALALKG 84 68****6..779*********965...5***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MKRSNMEPKL EVGSSSAQSQ KRKAGRKKFQ ETRHPVYKGV RKRNGKWVSE LREPSKQSRI 60 WLGTFSSPRK AARADDAAAL ALKGDSASFN FPELASTLPR ACSSSIRDIQ LAAVEAAEAF 120 EDSTVSKSTS SPSPSLSSSP SSSPPPPLPC LETSSDVNVE KGSEKLYLDE EEVFNMPGIL 180 DSMAEGLIVT PPAMQKGYYN WDDDDEDDSV EFSLWGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO82091 |