PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW19445

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 365aa MW: 40199 Da PI: 6.1765

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW19445	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.8	7.1e-06	22	62	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ ++ + lfC++++ +lC C +++H+ H+ OIW19445 22 KLCDCCKLASAALFCHSDSAFLCIACDSKIHSVnklssrHE 62 78***999*******************4355666665 PP
2	zf-B_box	26	1.9e-08	64	107	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 ++C+ +e+ ++ C+ + lC +C + +H+ H++v OIW19445 64 VWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSAnplaqrHDRV 107 689*****************************668888888877 PP
3	CCT	69.6	7.9e-24	287	331	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k+ae OIW19445 287 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRAE 331 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGIEEGGINL KGLRSGWSVP PKLCDCCKLA SAALFCHSDS AFLCIACDSK IHSVNKLSSR 60 HERVWMCEVC EQAPAAVTCK ADAAALCVTC DSDIHSANPL AQRHDRVAVE PFFDSAESIV 120 KASAANFMFA VPTDDAVASN GYNQDDSWVI PNPNYGSKII DAPDIKSREM FFSEMDPFID 180 FDNSNNFFHN GNDSVVPVQN KPVPVMNHNP SEACFDIDFC RSKLSSFNYP SHSINQSVSS 240 SDVGVVPDKN TVSEISYSFG INSSDSSGMV SGGNSQNQAT QLCGMDREAR VLRYREKRKN 300 RKFEKTIRYA SRKAYAETRP RIKGRFAKRA ELESDVDHLY SSSNDVVSVP ATFMLDTHYG 360 VVPSF

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGIEEGGINL KGLRSGWSVP PKLCDCCKLA SAALFCHSDS AFLCIACDSK IHSVNKLSSR  60
HERVWMCEVC EQAPAAVTCK ADAAALCVTC DSDIHSANPL AQRHDRVAVE PFFDSAESIV  120
KASAANFMFA VPTDDAVASN GYNQDDSWVI PNPNYGSKII DAPDIKSREM FFSEMDPFID  180
FDNSNNFFHN GNDSVVPVQN KPVPVMNHNP SEACFDIDFC RSKLSSFNYP SHSINQSVSS  240
SDVGVVPDKN TVSEISYSFG INSSDSSGMV SGGNSQNQAT QLCGMDREAR VLRYREKRKN  300
RKFEKTIRYA SRKAYAETRP RIKGRFAKRA ELESDVDHLY SSSNDVVSVP ATFMLDTHYG  360
VVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-111	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW19445