PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17681

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CAMTA

Protein Properties

Length: 863aa MW: 97807.6 Da PI: 7.8678

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17681	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	131.3	3.5e-41	25	108	35	118
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 k g+++L++rkk+r+frkDG++wkkkkdgkt++E+he+LKvg+ e +++yYah+++n+ f rrcywlL+++ e+ivlvhy+e++ OIW17681 25 KGGTVVLFDRKKLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGQDNTDFVRRCYWLLDKSVEHIVLVHYRETQ 108 789******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MDMMMANKIE GQLMGSEIHG FYTLKGGTVV LFDRKKLRNF RKDGHNWKKK KDGKTIKEAH 60 EHLKVGNEER IHVYYAHGQD NTDFVRRCYW LLDKSVEHIV LVHYRETQEV QASPVSHVNS 120 NSSSSDPAAL LITSEEIDSR TNIAYAGEIN HNSAVKSHEL RLLEINTLEW DDLVLANDLN 180 SSTVPNEGTV QDFDQQNQVL LNNSFNNPVA SNRSAEIPSF DYLTQPIAVS DSVPYNFSES 240 VNLQTVHNQV NPIEHRNHPV SASNNLVNDK LQSQNSTGMW VNIISDSPCS VDESALESSV 300 SSVHESYSSP VVDNQQSSLP EQVFNLTDLS PTWVSSTEKS KVLVTGFFHK DYQHLSKSNL 360 LCVCGDVSVA VETVQVGVYR CWLSPHSPGF VNLYLSFDGH KPISQVVNFE YRTTVLHDPA 420 VSMEQNDNWD EFLLQTRLAH LLFAKQKSLD VFSSSVSPNA LKEARQFALK ASYISNNWQY 480 LIKSTEDKKI PFLQAKEALL GTALKNRLKD WLLERIVLGC RTTEFDAQGQ SVIHLCAILE 540 YTWAVSLFLW SGLSLDFRDK FGWTALHWAA YYGREKMVAT LLSAGAKPNL VTDPTPQNPG 600 GCTAADIAYM KGYDGLAGYL SEKSLVEQFN DMSLAGNIRG SLKSSTTEPV GSDNLTEEQL 660 YLNDTLAAYR TAAEAAARIQ AAFREHSLKL QMEAVEFCSP EAEARVIVAA MKIQHAYRNY 720 ETRKMMAAAV RIQHTYRTWK TRKEFLKMRR QAIKIQAAFR QFQARKNYRQ ILWSVGVVEK 780 AVLRWRLKRR GLRGLQVNPV EATGDQKPES DVEEDFFRIG RKQASERVER SVVRVQAMFR 840 SKKAQEEYRR MKLTLTQAKV TNF

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MDMMMANKIE GQLMGSEIHG FYTLKGGTVV LFDRKKLRNF RKDGHNWKKK KDGKTIKEAH  60
EHLKVGNEER IHVYYAHGQD NTDFVRRCYW LLDKSVEHIV LVHYRETQEV QASPVSHVNS  120
NSSSSDPAAL LITSEEIDSR TNIAYAGEIN HNSAVKSHEL RLLEINTLEW DDLVLANDLN  180
SSTVPNEGTV QDFDQQNQVL LNNSFNNPVA SNRSAEIPSF DYLTQPIAVS DSVPYNFSES  240
VNLQTVHNQV NPIEHRNHPV SASNNLVNDK LQSQNSTGMW VNIISDSPCS VDESALESSV  300
SSVHESYSSP VVDNQQSSLP EQVFNLTDLS PTWVSSTEKS KVLVTGFFHK DYQHLSKSNL  360
LCVCGDVSVA VETVQVGVYR CWLSPHSPGF VNLYLSFDGH KPISQVVNFE YRTTVLHDPA  420
VSMEQNDNWD EFLLQTRLAH LLFAKQKSLD VFSSSVSPNA LKEARQFALK ASYISNNWQY  480
LIKSTEDKKI PFLQAKEALL GTALKNRLKD WLLERIVLGC RTTEFDAQGQ SVIHLCAILE  540
YTWAVSLFLW SGLSLDFRDK FGWTALHWAA YYGREKMVAT LLSAGAKPNL VTDPTPQNPG  600
GCTAADIAYM KGYDGLAGYL SEKSLVEQFN DMSLAGNIRG SLKSSTTEPV GSDNLTEEQL  660
YLNDTLAAYR TAAEAAARIQ AAFREHSLKL QMEAVEFCSP EAEARVIVAA MKIQHAYRNY  720
ETRKMMAAAV RIQHTYRTWK TRKEFLKMRR QAIKIQAAFR QFQARKNYRQ ILWSVGVVEK  780
AVLRWRLKRR GLRGLQVNPV EATGDQKPES DVEEDFFRIG RKQASERVER SVVRVQAMFR  840
SKKAQEEYRR MKLTLTQAKV TNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	50	RKKLRNFRKDGHNWKKK
2	34	51	RKKLRNFRKDGHNWKKKK
3	35	51	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OIW17681