PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW17075
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 268aa    MW: 30090.1 Da    PI: 7.4532
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW17075genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.13.2e-30959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krien+snrqvtfskRr+g+lKKA+ELSvLCdaevaviifs+tgkl  +ss
  OIW17075  9 KRIENSSNRQVTFSKRRTGLLKKAKELSVLCDAEVAVIIFSNTGKLSQFSS 59
              79***********************************************96 PP
2K-box59.81.1e-2010218715100
     K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
               ++ ++ ++ L++ei +L+r++ +llG+dL+ LslkeLq+Le+qL+++l ++ ++K+el++eq+e+++ +e+++  en++Lr++++e
  OIW17075 102 KEDSTMVEILRDEIAKLERKKQKLLGKDLKGLSLKELQNLEKQLNEGLLSVTKRKEELVTEQLEQSRVQEQRVMLENETLRRQVKE 187
               556677889**************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRGKVELKR IENSSNRQVT FSKRRTGLLK KAKELSVLCD AEVAVIIFSN TGKLSQFSSC  60
DMNGTLSKYN KCVDSTETAV VEHKTEIHYG VVMSNNTFSV QKEDSTMVEI LRDEIAKLER  120
KKQKLLGKDL KGLSLKELQN LEKQLNEGLL SVTKRKEELV TEQLEQSRVQ EQRVMLENET  180
LRRQVKELRS LFPVTENVVP SYLQYQNIER NNTFALAGAS SSNLASNSGN DGGDSDNTLQ  240
LGFLNDVHHK GMVSEKETSL NDSECALL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.17e-59MIKC_MADS family protein