PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIW05137

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 285aa MW: 32253.3 Da PI: 8.3186

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05137	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OIW05137 101 YECKTCNRCFPSFQALGGHRASH 123 99**********99999998887 PP
2	zf-C2H2	13.4	0.00024	186	208	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H OIW05137 186 HECSICGSEFTSGQALGGHMRRH 208 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MQVQEEQQQH DLNHMQMIKL KGKRTKRQRL PSLFTLAMPS TSSTDNSEEE EDMANCLILL 60 AQGRHHHDHH QKQNSSPESY QTTTPDHSNN NNRKKLGLCI YECKTCNRCF PSFQALGGHR 120 ASHKKPKTSI AQDQKPGVTS FVNDCFDNYF DSTTTNTTLT LQIPNNRALF STNPTTRTIT 180 KCNKVHECSI CGSEFTSGQA LGGHMRRHRT VLSTTSTTTF MSGAKNIRVC ESPHESIEVK 240 KPRNVLELDL NLPAPDEDHR ECKLPFQSKE KVIVLNATSL VDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	6e-47	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW05137