PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99816

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 350aa MW: 38961 Da PI: 6.769

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99816	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.9	1.8e-07	21	61	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++ C+ ++ ++lfC+ ++++lC C +++H+ H OIV99816 21 PKLCDSCKLASATLFCHPDSMFLCILCDSKIHSFnkhgsrH 61 578****99******************9556644455 PP
2	zf-B_box	27.7	5.6e-09	64	109	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC +C + +H+ H++vp+ OIV99816 64 VWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSAnplaqrHDRVPV 109 689*****************************66899999999986 PP
3	CCT	70.6	4e-24	272	315	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ OIV99816 272 REARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 315 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGIERGGLIL KGLRSGWSVP PKLCDSCKLA SATLFCHPDS MFLCILCDSK IHSFNKHGSR 60 HERVWMCEVC EQAPAAVTCK ADAAALCVTC DSDIHSANPL AQRHDRVPVE PFYDSAEFIV 120 KASAANFGFV VPTDDGITSN GLNQDEPWLI PNPNYGSKLM DAPDIKSREM FFSDMDPFLD 180 FDNSTNFIHN TGNDSVVPVQ TKTAPIMIHH SSEACFDNEF SRSKLSSFNY PSQSISQSVS 240 SSDVGVVPDA NTVSEMSYSF VRNSSDSNAM DREARVMRYR EKRKNRKFEK TIRYASRKAY 300 AETRPRIKGR FAKRTEIEPD MDRLYNPSSA VASVPATIML DTPYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGIERGGLIL KGLRSGWSVP PKLCDSCKLA SATLFCHPDS MFLCILCDSK IHSFNKHGSR  60
HERVWMCEVC EQAPAAVTCK ADAAALCVTC DSDIHSANPL AQRHDRVPVE PFYDSAEFIV  120
KASAANFGFV VPTDDGITSN GLNQDEPWLI PNPNYGSKLM DAPDIKSREM FFSDMDPFLD  180
FDNSTNFIHN TGNDSVVPVQ TKTAPIMIHH SSEACFDNEF SRSKLSSFNY PSQSISQSVS  240
SSDVGVVPDA NTVSEMSYSF VRNSSDSNAM DREARVMRYR EKRKNRKFEK TIRYASRKAY  300
AETRPRIKGR FAKRTEIEPD MDRLYNPSSA VASVPATIML DTPYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-108	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIV99816