PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIV99337 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 200aa MW: 22793.8 Da PI: 10.0783 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 48.4 | 2.1e-15 | 94 | 181 | 12 | 98 |
NF-YC 12 katdf.knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 +++d+ k h++P+ ri+ ++k ++ +++s ea + + ka e f+ ++tl ++ ++ + ++++l +a +v++ +dfl d vp OIV99337 94 DEEDVsKTHAFPINRIRTVIKGEDPNSRVSHEAIIAINKATEKFLEQFTLDAYTRCVQERKKSLSYMHLAHVVSKERRYDFLSDFVPG 181 445552689**************99************************************************************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MASSNKEKKI VEDKKEQKNK EDKKKEQKVK EKKEVKNKEE KLNLSNGNLK QHKEKSLIAL 60 CSSDLKKQDN NAIVVNGTTS GTKPKRKREE HEDDEEDVSK THAFPINRIR TVIKGEDPNS 120 RVSHEAIIAI NKATEKFLEQ FTLDAYTRCV QERKKSLSYM HLAHVVSKER RYDFLSDFVP 180 GKVKAEDALK ERNSGGSGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07980.1 | 3e-26 | NF-YC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIV99337 |