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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT38959 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26001.1 Da PI: 5.7543 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 43 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + + +Wv+e+r+ps+ +kr++lg++ tae+Aa+a++ a+++l+g OIT38959 43 PVYRGVRKRN-NDKWVCELREPST---QKRIWLGSYPTAEMAARAHDIAALALRG 93 68*****888.8*********965...4*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNNSSSSSHV RVAVSDEEDI NILALRKPKK RAGRKKFKET RHPVYRGVRK RNNDKWVCEL 60 REPSTQKRIW LGSYPTAEMA ARAHDIAALA LRGPLATLNF ADSAWRLPVP VSKDPKDLRH 120 AAAKAAEPFW SGEETDVNSR VAANTGNGSE EMKAAAEEDN AVYNCMQNTV IAENVLYSNY 180 SCSEVGMVGT QEWLANMEER SLFSPNPCLL GSCFSWDDDV ESDVEVSLWS YSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12610.1 | 4e-36 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT38959 |