PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT38492

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 1019aa MW: 111356 Da PI: 5.5773

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT38492	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	613	664	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ OIT38492 613 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 664 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1019 aa Download sequence
MSEPEEKITS KYLPPKSKEF SPPPPPQQPP YTAAARESTA MMMDLDLDID ASWSFDQIFA 60 AAAAVSSNPT SPFLPCSPLW AFSDDIDEKP AGNSFSGALR LSGHPRFGAT YTDDPEATTE 120 TVSVNADKGR LPSPILELAP RDYPNGSCII KERMTQALRY FKESTGERVL AQVWAPVKDA 180 GRYVLTTSGQ PFVLDPDCNG LHQYRTVSLM YMFAADGETG GVLGLPGRVF RLKLPEWTPN 240 VQYYSSKEFP RLDHALHYNV RGTLALPVFE PSGQSCLGVL ELIMTSQKIN YAAEVDKVCK 300 ALETVNLKSS EILDHPNTQV YVMGYMNQIC NEGRQNALVE ILEILTAVCE TYQLPLAQTW 360 VPCRHRSVLA DGGGLKKSCS SFDGSCMGQI CMSTTDVAFY VVDAHMWGFR EACAEHHLQK 420 GQGVAGRAYA SQKSCFSEDI TQFCKTEYPL VHYARLFGLT SCFAICLRSS HTGNDDYILE 480 FFLPPNSGDY SDQQALLNSL LLTMKQHFRS LSIASGGELE HDWSSVEIIK ASMEEKIDAK 540 PESVPAPKSL PQPTRLPNGR THLDPLGEQQ FSVESDVAKG AGSKSGTGEA PNHISPSDNK 600 PTGKKSERKR GKAEKTISLE VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ HGISRWPSRK 660 INKVNRSLSK LKCVIESVQG TEGAFTLTSL AQNSLPAAVG SISWPACASG SNLPSSPLSK 720 PSVFPEEKNE FSNHGTPENH EEAEPSYQML GGRVTRKEEF TLQNGFLRAE GSHKSRTGSV 780 SREESAGTPM SQGSCQGSPS AGNEFSPQND LVNSPAREAR MKVGGSLEAA HQTTTENNLA 840 AAFLIPRPFI PERAQEPFGG MLVEDAGSSH DLRNLCPAGD ALVDECVPEY GLPNPPFSDK 900 IAKDPVYVPA DTTPQYSAWP EVTFVTIKAA YREDIIRFRL CLNSGIFKLN EEVAKRLKLE 960 LGTFDIKYRD DDLELVSISC DADLQECVDI SLSSGSSIIR LLVHDIMSNL GSSCESSGK

Sequence ? help Back to Top

Protein Sequence Length: 1019 aa Download sequence

MSEPEEKITS KYLPPKSKEF SPPPPPQQPP YTAAARESTA MMMDLDLDID ASWSFDQIFA  60
AAAAVSSNPT SPFLPCSPLW AFSDDIDEKP AGNSFSGALR LSGHPRFGAT YTDDPEATTE  120
TVSVNADKGR LPSPILELAP RDYPNGSCII KERMTQALRY FKESTGERVL AQVWAPVKDA  180
GRYVLTTSGQ PFVLDPDCNG LHQYRTVSLM YMFAADGETG GVLGLPGRVF RLKLPEWTPN  240
VQYYSSKEFP RLDHALHYNV RGTLALPVFE PSGQSCLGVL ELIMTSQKIN YAAEVDKVCK  300
ALETVNLKSS EILDHPNTQV YVMGYMNQIC NEGRQNALVE ILEILTAVCE TYQLPLAQTW  360
VPCRHRSVLA DGGGLKKSCS SFDGSCMGQI CMSTTDVAFY VVDAHMWGFR EACAEHHLQK  420
GQGVAGRAYA SQKSCFSEDI TQFCKTEYPL VHYARLFGLT SCFAICLRSS HTGNDDYILE  480
FFLPPNSGDY SDQQALLNSL LLTMKQHFRS LSIASGGELE HDWSSVEIIK ASMEEKIDAK  540
PESVPAPKSL PQPTRLPNGR THLDPLGEQQ FSVESDVAKG AGSKSGTGEA PNHISPSDNK  600
PTGKKSERKR GKAEKTISLE VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ HGISRWPSRK  660
INKVNRSLSK LKCVIESVQG TEGAFTLTSL AQNSLPAAVG SISWPACASG SNLPSSPLSK  720
PSVFPEEKNE FSNHGTPENH EEAEPSYQML GGRVTRKEEF TLQNGFLRAE GSHKSRTGSV  780
SREESAGTPM SQGSCQGSPS AGNEFSPQND LVNSPAREAR MKVGGSLEAA HQTTTENNLA  840
AAFLIPRPFI PERAQEPFGG MLVEDAGSSH DLRNLCPAGD ALVDECVPEY GLPNPPFSDK  900
IAKDPVYVPA DTTPQYSAWP EVTFVTIKAA YREDIIRFRL CLNSGIFKLN EEVAKRLKLE  960
LGTFDIKYRD DDLELVSISC DADLQECVDI SLSSGSSIIR LLVHDIMSNL GSSCESSGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIT38492