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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT32629 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 323aa MW: 36741.7 Da PI: 4.8668 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 173.7 | 5.2e-54 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
lppGfrFhPtdeel+ +yLk+k++g ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rdkky++g+r+nratksgyWkatgkd++v++++ e+
OIT32629 6 LPPGFRFHPTDEELIGYYLKRKTDGLEIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDKKYPNGSRTNRATKSGYWKATGKDRKVTCHQPEV 105
79****************************.99**************95344555788******************************************* PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
vg +ktLvfy+grap g +tdWvmheyrl
OIT32629 106 VGYRKTLVFYRGRAPLGDRTDWVMHEYRL 134
***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 323 aa Download sequence |
MGGTSLPPGF RFHPTDEELI GYYLKRKTDG LEIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKVTC HQPEVVGYRK TLVFYRGRAP 120 LGDRTDWVMH EYRLCDDVSQ GTPNFQGPFA LCRIIKRNAS LKTSDTSVAV SNEPVVLTAE 180 TPTQTTYMSN DSNYSTPITS PYEGTNAASF WMSNDMILDS SKECSQGQST RGNYPNYVFP 240 DMTLTQPSDR FEFTSSSSFP NFRGEVELSG DLSSYGCVSP YSVHGNYTGF YGNDDMSYEG 300 CEGWNQANMG DFNGLWSHED NFQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17980.1 | 1e-103 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT32629 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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