PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31210

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 455aa MW: 51238.7 Da PI: 7.9784

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31210	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3e-15	75	125	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ g++vAe+ dp+ k kr++lg++ ta +Aa a++ a+ +l+g OIT31210 75 CYRGIRQRP-GGKFVAEVSDPTR--KGKRVWLGTYKTAIDAAMAYDSAAFRLRG 125 8******.9**888643..34***********************98 PP
2	RWP-RK	56.1	7.3e-18	272	320	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e l+++F +++ dAAk+L v+ ++LKr CR+y+I+RWPh k +++ OIT31210 272 GITREILEQHFGKTLVDAAKTLRVSRSTLKRVCREYNISRWPHHKTRKV 320 58999****************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MASLQKSTLD LTSQHFLDGV DFWENFLTSE TNTSSDLNSF KFEAKAPRIS SNSRKFSSKT 60 EDSVQKMVDT LKAKCYRGIR QRPGGKFVAE VSDPTRKGKR VWLGTYKTAI DAAMAYDSAA 120 FRLRGSRAIL NFPHLFMEND SQRSENNGTA LFVPSCSSHR HDLLNNEGLE QVDLLLPHAT 180 EATVMNTGSM VNANVAHDFC NDGGETVQPD LRCEKSNVEI DSSSNDKVEH NDIAGGSSSC 240 ERLLVEADAM TNIQNIDSKN KCTIARLEKD YGITREILEQ HFGKTLVDAA KTLRVSRSTL 300 KRVCREYNIS RWPHHKTRKV YHRVSQGVSL QSAEPYVEDI QQRPDLSQKK GTDLLAHKKS 360 PAAEKRCDNL MTLKVTYRGD IIKFQLSPSA TRVELEVEVE KRFNISLQKC SIKYQDDDDD 420 WILITSNSDL RDGMNSLRLL GRTTMKLLVT PISET

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MASLQKSTLD LTSQHFLDGV DFWENFLTSE TNTSSDLNSF KFEAKAPRIS SNSRKFSSKT  60
EDSVQKMVDT LKAKCYRGIR QRPGGKFVAE VSDPTRKGKR VWLGTYKTAI DAAMAYDSAA  120
FRLRGSRAIL NFPHLFMEND SQRSENNGTA LFVPSCSSHR HDLLNNEGLE QVDLLLPHAT  180
EATVMNTGSM VNANVAHDFC NDGGETVQPD LRCEKSNVEI DSSSNDKVEH NDIAGGSSSC  240
ERLLVEADAM TNIQNIDSKN KCTIARLEKD YGITREILEQ HFGKTLVDAA KTLRVSRSTL  300
KRVCREYNIS RWPHHKTRKV YHRVSQGVSL QSAEPYVEDI QQRPDLSQKK GTDLLAHKKS  360
PAAEKRCDNL MTLKVTYRGD IIKFQLSPSA TRVELEVEVE KRFNISLQKC SIKYQDDDDD  420
WILITSNSDL RDGMNSLRLL GRTTMKLLVT PISET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47220.1	9e-22	ERF family protein

Link Out ? help Back to Top
Ensembl	OIT31210