PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28819
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 183aa    MW: 20684.1 Da    PI: 6.5224
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28819genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1957107255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GVr ++ +g+++AeIrd s ng   r++lg+f+taeeAa a+++a+++++g
  OIT28819  57 HYIGVRKRP-WGKFAAEIRDSSRNG--IRVWLGTFDTAEEAALAYDQAALSIRG 107
               699******.**********55465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MNSSPCSEFS FDSNWPPLFL NTHDVEEQKM ISSEKSASSK EIKSEKVQEL PNKEENHYIG  60
VRKRPWGKFA AEIRDSSRNG IRVWLGTFDT AEEAALAYDQ AALSIRGPST CLNFPVERVQ  120
ESLRGFKCSG KEGSSQVEAI KEKHKKRHTK GKRKQTKEEN VLVFEDLGSD LLDELLSECS  180
TSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-28ERF family protein