PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26902

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CAMTA

Protein Properties

Length: 926aa MW: 104541 Da PI: 7.671

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26902	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.1	1.2e-51	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 +e k rwl+++ei+aiL n++ +++ ++ + p+sg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e++ptf rrcywlL OIT26902 30 EEaKMRWLRPNEIHAILCNYKYFNIFVKPVNLPTSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDHPTFVRRCYWLL 130 45599********************************************************************************************** PP CG-1 103 eeelekivlvhylevk 118 +++le+ivlvhy+e++ OIT26902 131 DKSLEHIVLVHYRETQ 146 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 926 aa Download sequence
MESSRAGQLA GSDIHGFHTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN 60 LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDHP 120 TFVRRCYWLL DKSLEHIVLV HYRETQEAQG SPATSVAKGS PATPVNSNSS SDPSDPSGWV 180 LSEECNSVDE RTYGSSQHAH LEPNRDVTAK NHEQRLLEIN TLEWDELLAP DNPNKLIATQ 240 EGGGRVSVGQ QNQFEVNGYS LNDGSLSVSR VPVASLESFV CQVAGSDTVN FNPSNDMSFR 300 SGDGQMTSNF QKNESGVTTV GAGDSFDSLN KDGLQTQDSF GRWINYFISD SPGSADEMMT 360 PESSVTIDQS YAMQQIFNIT EISPTWALSS EETKILVIGH FPGAQSQLAK SNLFCVCADV 420 CFPAEFVQSG VYRCVISPQP PGLVSLYLSF NGNTPISQVM TYEFRAPSAR KWTAPLEEQS 480 SWDEFRVQMR LAHLLFSTSK SLSIFSSKVH QDSLKEAKRF VRKCSHITDN WAYLIKSIED 540 RKLPVPHAKD CLFELSLQTK FHEWLLERVI GGCKTSEWDE QGQGVIHLCA ILGYTWAVYP 600 FSWSGLSLDY RDKYGWTALH WAAHYGREKM VATLLSAGAK PNLVTDPTSE NPGGSTAADL 660 ASKNGFEGLG AYLAEKALVA HFKDMTLAGN VSGSLQTTTE PINPGNFTEE ELYLKDTLAA 720 YRTAADAAAR IQAAFREHSF NVQTKAVESS NPEIEARNIV AAMRIQHAFR NYESRKKLAA 780 AARIQYRFRS WKMRKDFLNM RRHAIKIQAV FRGFQVRKQY RKIVWSVGVL EKAVLRWRLK 840 RKGFRGLQVQ SSQALDIEPD GNVEEDFFRA SRKQAEERVE RSVVRVQAMF RSKRAQEEYR 900 RMKLEHDNAT LEYERASLLN PDIRIG

Sequence ? help Back to Top

Protein Sequence Length: 926 aa Download sequence

MESSRAGQLA GSDIHGFHTL QDLDIPSIME EAKMRWLRPN EIHAILCNYK YFNIFVKPVN  60
LPTSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDHP  120
TFVRRCYWLL DKSLEHIVLV HYRETQEAQG SPATSVAKGS PATPVNSNSS SDPSDPSGWV  180
LSEECNSVDE RTYGSSQHAH LEPNRDVTAK NHEQRLLEIN TLEWDELLAP DNPNKLIATQ  240
EGGGRVSVGQ QNQFEVNGYS LNDGSLSVSR VPVASLESFV CQVAGSDTVN FNPSNDMSFR  300
SGDGQMTSNF QKNESGVTTV GAGDSFDSLN KDGLQTQDSF GRWINYFISD SPGSADEMMT  360
PESSVTIDQS YAMQQIFNIT EISPTWALSS EETKILVIGH FPGAQSQLAK SNLFCVCADV  420
CFPAEFVQSG VYRCVISPQP PGLVSLYLSF NGNTPISQVM TYEFRAPSAR KWTAPLEEQS  480
SWDEFRVQMR LAHLLFSTSK SLSIFSSKVH QDSLKEAKRF VRKCSHITDN WAYLIKSIED  540
RKLPVPHAKD CLFELSLQTK FHEWLLERVI GGCKTSEWDE QGQGVIHLCA ILGYTWAVYP  600
FSWSGLSLDY RDKYGWTALH WAAHYGREKM VATLLSAGAK PNLVTDPTSE NPGGSTAADL  660
ASKNGFEGLG AYLAEKALVA HFKDMTLAGN VSGSLQTTTE PINPGNFTEE ELYLKDTLAA  720
YRTAADAAAR IQAAFREHSF NVQTKAVESS NPEIEARNIV AAMRIQHAFR NYESRKKLAA  780
AARIQYRFRS WKMRKDFLNM RRHAIKIQAV FRGFQVRKQY RKIVWSVGVL EKAVLRWRLK  840
RKGFRGLQVQ SSQALDIEPD GNVEEDFFRA SRKQAEERVE RSVVRVQAMF RSKRAQEEYR  900
RMKLEHDNAT LEYERASLLN PDIRIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OIT26902