PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04109 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Dof | ||||||||
Protein Properties | Length: 231aa MW: 23840.3 Da PI: 7.1777 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.2 | 4.3e-39 | 25 | 83 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrn+PvGgg+rkn ++ OIT04109 25 PENLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNIPVGGGTRKNSSH 83 57899**************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MSSEVGDRRQ ARLPAPANGT RPSEPENLPC PRCDSTNTKF CYYNNYNLSQ PRHFCKSCRR 60 YWTRGGTLRN IPVGGGTRKN SSHKRPRNTT SVTPQESVNA TPITMVGSGQ ASGSGSVSFM 120 GCEVNLNESV QEAGGATNGT FTSLLTGPVG GGFVPLGGFG LGLGGFGLGN LDWPMEQVGG 180 GNGGGGDGGE NMKWQLSSGE IEGGGGGGIG DDDCFGNWPD LAISAPGTSL K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 1e-33 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04109 |