PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G15030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 29380.8 Da PI: 7.7621 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.5e-20 | 103 | 152 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa +++a+ +l+g OGLUM08G15030.1 103 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALTYDQAAYRLRG 152 59******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MAAAIEGNLM RALGEAPSPQ MQKIAPPPFH PSLPPAPANF SSAGVHGFHY MGPAQLSPAQ 60 IQRVQAQLHM QRQAQSGLGP RAQPMKPASA AAPAAAAARA QKLYRGVRQR HWGKWVAEIR 120 LPRNRTRLWL GTFDTAEEAA LTYDQAAYRL RGDAARLNFP DNAASRGPLD AAVDAKLQAI 180 CDTIAASKNA SSRSRGGAGR AMPINAPLVA AASSSSGSDH SGGGDDGGSE TSSAAASPLA 240 EMEQLDFSEV PWDEAEGFAL TKYPSYEIDW DSLLNNNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78080.1 | 4e-50 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G15030.1 |