PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G13800.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 930aa MW: 104276 Da PI: 7.4941

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G13800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.7	3.7e-52	31	146	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e +rw +++ei+aiL+n++++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdg+tv+E+hekLK+g+ e +++yYa++e++p+f OGLUM07G13800.2 31 AEaAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEDDPNFF 124 45589*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL+++le+ivlvhy+++ OGLUM07G13800.2 125 RRCYWLLDKDLERIVLVHYRQT 146 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence
MAGAGGWDPL VGSEIHGFLT YPDLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV 60 DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE KLKIGNEERV HVYYARGEDD 120 PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADVPTVNLI HYTSPLTSAD 180 STSGHTELSL PEEINSHGGI SASSETGNHD SSLEEFWANL LESSIKNDPK VVTSACGGIF 240 DKAMTIDITV VDQQINNGPK NSGNIFNTSM ASNAIPALNV VSETYATNHG LNQVNANHFG 300 ALKHQGDQTQ SLLASDVDSQ SDQFISSSVK SPMDGNTSIP NEVPARQNSL GLWKYLDDDS 360 PGLGDNPSSV PQSFCPVTNE RLLEINEISP EWAYSTETTK VVVIGNFYEQ YKHLAGSAMF 420 GVFGDQCVAG DIVQTGVYRF MVGPHTPGKV DFYLTLDGKT PISEICSFTY HVMHGSSLEA 480 RLPPSEDDYK RTNLQMQMRL ARLLFATNKK KIAPKLLVEG TKVANLMSAL SEKEWMDLWN 540 ILSDPEGTYV PVTESLLELV LRNRLQEWLV EMVMEGHKST GRDDLGQGAI HLCSFLGYTW 600 AIRLFSLSGF SLDFRDSSGW TALHWAAYHG RERMVATLLS AGANPSLVTD PTPESPAGLT 660 AADLAARQGY DGLAAYLAEK GLTAHFEAMS LSKDTEQSPS KTRLTKLQSE KFEHLSEQEL 720 CLKESLAAYR NAADAASNIQ AALRERTLKL QTKAIQLANP EIEASEIVAA MKIQHAFRNY 780 NRKKAMRAAA RIQSHFRTWK MRRNFINMRR QVIRIQAAYR GHQVRRQYRK VIWSVGIVEK 840 AILRWRKKRK GLRGIASGMP VVMTVDAEAE PASTAEEDFF QAGRQQAEDR FNRSVVRVQA 900 LFRSYKAQQE YRRMKIAHEE AKHDHLFIRL

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence

MAGAGGWDPL VGSEIHGFLT YPDLNYEKLV AEAAARWFRP NEIYAILANH ARFKIHAQPV  60
DKPVSGTVVL YDRKVVRNFR KDGHNWKKKK DGRTVQEAHE KLKIGNEERV HVYYARGEDD  120
PNFFRRCYWL LDKDLERIVL VHYRQTAEEN AMAPPNPEPE VADVPTVNLI HYTSPLTSAD  180
STSGHTELSL PEEINSHGGI SASSETGNHD SSLEEFWANL LESSIKNDPK VVTSACGGIF  240
DKAMTIDITV VDQQINNGPK NSGNIFNTSM ASNAIPALNV VSETYATNHG LNQVNANHFG  300
ALKHQGDQTQ SLLASDVDSQ SDQFISSSVK SPMDGNTSIP NEVPARQNSL GLWKYLDDDS  360
PGLGDNPSSV PQSFCPVTNE RLLEINEISP EWAYSTETTK VVVIGNFYEQ YKHLAGSAMF  420
GVFGDQCVAG DIVQTGVYRF MVGPHTPGKV DFYLTLDGKT PISEICSFTY HVMHGSSLEA  480
RLPPSEDDYK RTNLQMQMRL ARLLFATNKK KIAPKLLVEG TKVANLMSAL SEKEWMDLWN  540
ILSDPEGTYV PVTESLLELV LRNRLQEWLV EMVMEGHKST GRDDLGQGAI HLCSFLGYTW  600
AIRLFSLSGF SLDFRDSSGW TALHWAAYHG RERMVATLLS AGANPSLVTD PTPESPAGLT  660
AADLAARQGY DGLAAYLAEK GLTAHFEAMS LSKDTEQSPS KTRLTKLQSE KFEHLSEQEL  720
CLKESLAAYR NAADAASNIQ AALRERTLKL QTKAIQLANP EIEASEIVAA MKIQHAFRNY  780
NRKKAMRAAA RIQSHFRTWK MRRNFINMRR QVIRIQAAYR GHQVRRQYRK VIWSVGIVEK  840
AILRWRKKRK GLRGIASGMP VVMTVDAEAE PASTAEEDFF QAGRQQAEDR FNRSVVRVQA  900
LFRSYKAQQE YRRMKIAHEE AKHDHLFIRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G13800.2