PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G29360.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 292aa    MW: 32973.4 Da    PI: 8.208
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G29360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.71.2e-45201512128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk....rknratksgyWkatgkdke 91 
                       pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++P++Lp  ++ +e+ewyfF++rd+k+atg     r++r+t++g+Wkatg+d++
  OGLUM06G29360.1  20 LPGFRFHPTEEELLEFYLKQVVQGKKLKF-DIIPTVHLYRHDPRELPGLARIGEREWYFFVPRDRKQATGGggggRPSRTTERGFWKATGSDRA 112
                      59**************************9.99***************8778899**************7555556******************* PP

              NAM  92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      v ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  OGLUM06G29360.1 113 VRCAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 151
                      **98777788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEQQRSRSTA AGGEVEVEQL PGFRFHPTEE ELLEFYLKQV VQGKKLKFDI IPTVHLYRHD  60
PRELPGLARI GEREWYFFVP RDRKQATGGG GGGRPSRTTE RGFWKATGSD RAVRCAADPK  120
RLIGLKKTLV YYEGRAPRGT KTDWVMNEYR LPDPAAIPDT MQLQMQHDDM VLCKVYRKAV  180
SLKELEQRVA MEELARSTTS SGTHNTGSPL QQDSSSISIS SSSDAMKKEV VGVDEASAAA  240
HELVRPATLS LPQLEVARPQ SGLEWMQEPF LTQLRSPWME TWSPYYASVL NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-78NAC family protein