PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G10250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 173aa MW: 19603.2 Da PI: 11.4573 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 36 | 81 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd l ++ ++G+++W+++a+ m+ +R++ qc++rw+++l OGLUM06G10250.1 36 AWTPEEDAVLECLAMEHGSRHWRRVAAQMPRRRSPAQCRDRWRDHL 81 7******************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MDMELSSSSS STTVASSPAS SPPLGRCVLR FRLPPAWTPE EDAVLECLAM EHGSRHWRRV 60 AAQMPRRRSP AQCRDRWRDH LARDVFHRPF TAADDAELAR LCLRLDDDAG FAAGRRWKDV 120 SRAVYGRSSC AVKRRWRELR RSDAFLGALW RPRTTTTAPP ANAAITTTRD RLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 9e-13 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G10250.1 |