PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G04110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 349aa MW: 37380.4 Da PI: 4.5226 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.1e-18 | 122 | 172 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +g++ AeIr+ +++r++lg+f+taeeAa+ +++a+++l+g+ OGLUM06G04110.1 122 KFRGVRKRP-WGKYGAEIRV----SqQSARVWLGTFDTAEEAARVYDHAALRLRGP 172 89*******.**********....3245**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MIEAVVEKKA RRIVRGRWHV EASNEAAAAA PAVVAAPAPR VVRILYRDHD ATDSSGDDDG 60 EDDAPRRARL LVHEIHVARQ PVAMSPAAAA SSSQRRRVGP MKRRTEAAVD ATAAAEVAPE 120 RKFRGVRKRP WGKYGAEIRV SQQSARVWLG TFDTAEEAAR VYDHAALRLR GPSATTNFPV 180 TPTAPAPSPP PSRDTNAGAA SGYDESSDES QLVGSPVSVL RPMPARATAK KEAKEEDDSA 240 PDILGISAGD GLIFPFTGDV MNFPPPDEDM FGGGISFGEP TPPPMVFDDD CMARLGHVPN 300 DDVDDEHPVT SSYFLDDDLG DLPSWTEVDG FFSDVGGDDL FAAEPFPAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G04110.1 |