PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G04830.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 467aa MW: 53393.7 Da PI: 7.9036

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G04830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.1e-50	6	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrFhP+d+elvv+yL k+++ +++ ++ +vd++k+ePwdLp+ + + kewyf+ +d+kya+g+r+nrat+sgyWkatgkd OGLUM02G04830.1 6 LPPGFRFHPRDDELVVDYLSGKLRSGGaagagCPT-PTLIDVDLNKCEPWDLPEIACIGGKEWYFYNLKDRKYARGQRTNRATESGYWKATGKD 98 79*******************999966655444.35889********7666789****************************** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +e+++ kg+lvg++ktLvfy+grapkge+tdWvmhe+r OGLUM02G04830.1 99 REITR-KGSLVGMRKTLVFYRGRAPKGERTDWVMHEFRQ 136 9.999**************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MVEARLPPGF RFHPRDDELV VDYLSGKLRS GGAAGAGCPT PTLIDVDLNK CEPWDLPEIA 60 CIGGKEWYFY NLKDRKYARG QRTNRATESG YWKATGKDRE ITRKGSLVGM RKTLVFYRGR 120 APKGERTDWV MHEFRQELDH ANHHHHLKEG WVLCRVFYKS RTEAVAAPTM ESTLPPRYIN 180 GGTSRSPLPP LVDSSISFNH GGYEEVLPCF SSSHHQQPSP ASMNASAAAD DDQDYHHLSE 240 GQRHYSDKKM MRDVQNDQVT TRFDGHLAVK REMSLKKKDL SEDEQAAPNA DAGGFSILLK 300 YSVSKMTSLM KPIQRNISTL QEFLNQKKEV ILEKVEIFTK LLLPSRLGSA VFQLCLAHLI 360 KNHKVGISWD GIWELSDWEV ADNEVVLKMV GQCSAPADSK SKDLKRLFDL LRPYYDQEGK 420 DPHLFFEHLK FDFTDVLKTI VTDAKWEWFW KYLLNHVFVM PPTGNTY

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MVEARLPPGF RFHPRDDELV VDYLSGKLRS GGAAGAGCPT PTLIDVDLNK CEPWDLPEIA  60
CIGGKEWYFY NLKDRKYARG QRTNRATESG YWKATGKDRE ITRKGSLVGM RKTLVFYRGR  120
APKGERTDWV MHEFRQELDH ANHHHHLKEG WVLCRVFYKS RTEAVAAPTM ESTLPPRYIN  180
GGTSRSPLPP LVDSSISFNH GGYEEVLPCF SSSHHQQPSP ASMNASAAAD DDQDYHHLSE  240
GQRHYSDKKM MRDVQNDQVT TRFDGHLAVK REMSLKKKDL SEDEQAAPNA DAGGFSILLK  300
YSVSKMTSLM KPIQRNISTL QEFLNQKKEV ILEKVEIFTK LLLPSRLGSA VFQLCLAHLI  360
KNHKVGISWD GIWELSDWEV ADNEVVLKMV GQCSAPADSK SKDLKRLFDL LRPYYDQEGK  420
DPHLFFEHLK FDFTDVLKTI VTDAKWEWFW KYLLNHVFVM PPTGNTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	5e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G04830.1