PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI41888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 52aa MW: 6052.98 Da PI: 4.2508 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.2 | 7e-19 | 6 | 52 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lppGfrFhPtdeel+ +yLk+kveg ++el evi+ +d yk++Pw+Lp MCI41888.1 6 LPPGFRFHPTDEELIGYYLKRKVEGLEIEL-EVIPVIDFYKFDPWELP 52 79****************************.99**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 52 aa Download sequence |
MGGASLPPGF RFHPTDEELI GYYLKRKVEG LEIELEVIPV IDFYKFDPWE LP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 5e-31 | NAC family protein |