PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI38500.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family TCP
Protein Properties Length: 112aa    MW: 12288.2 Da    PI: 10.3875
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI38500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.96.1e-373299370
         TCP  3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70
                ++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+q++pai+e+tgt++ +a
  MCI38500.1 32 KAKRQSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEQSEPAIIEATGTGTVPA 99
                68999**********************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MKEELTETDN HNRQESLAVG VVPMPMTMTV PKAKRQSKDR HTKVEGRGRR IRMPAACAAR  60
IFQLTRELGH KSDGETIRWL LEQSEPAIIE ATGTGTVPAI AVSVGGTLKI PT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-47TCP family protein