PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI38294.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 126aa MW: 14509.4 Da PI: 8.8478 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.2 | 1.2e-13 | 13 | 60 | 82 | 128 |
NAM 82 yWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tgk+++++ +g++ g+kk++v+y+ + k+ekt+Wv+h+y++ MCI38294.1 13 RWHKTGKTRPIFL-DGNQRGCKKIMVLYTTpsNGGKAEKTNWVVHQYHI 60 7************.999***********6522666778*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
RRRIFDQDFG ELRWHKTGKT RPIFLDGNQR GCKKIMVLYT TPSNGGKAEK TNWVVHQYHI 60 GREEDEKDGE FVVSKIFYQQ QQPVKSGKKD DQDVPETSEA SIARVVDPVT PNFVTPELPC 120 NKKQCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-46 | NAC family protein |