PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI34915.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 88aa MW: 10284.6 Da PI: 9.5259 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99.8 | 3.9e-31 | 2 | 79 | 57 | 128 |
NAM 57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+++ ++ ++g +ktLvfy grap g +t+Wvmheyrl MCI34915.1 2 EWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCEpspfisTEPVIGYRKTLVFYCGRAPLGDRTNWVMHEYRL 79 8*************************************98888877777***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MEWFFFCPRD RKYPNGSRTN RATKAGYWKA TGKDRKVVCE PSPFISTEPV IGYRKTLVFY 60 CGRAPLGDRT NWVMHEYRLN DDPSQGSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 7e-42 | NAC family protein |