PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI25516.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 134aa MW: 15796.2 Da PI: 7.5208 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 121.4 | 1.1e-37 | 2 | 134 | 156 | 288 |
GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFl 254 e++eetg+rLa+++++++vpfefn+++++++e++++e+L++ ++E+++Vn ++ ++lldes +++s+r++vL+l+++++P +++ + + ++ns+ F+ MCI25516.1 2 EKIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNTLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFTQSIINGSYNSPFFA 100 6899*********************9999********************************************************************** PP GRAS 255 erflealeyysalfdsleaklpreseerikvEre 288 +rf eal ++salfd++++ +pre+e+r+++E+e MCI25516.1 101 TRFREALFHFSALFDMFDTVIPRENEHRMMMEKE 134 ********************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MEKIEETGRR LANYCKRFNV PFEFNAIASR NWETIRVEDL KIGSNEVVVV NTLMRFKNLL 60 DESIEVNSPR NAVLQLIRKI NPAIFTQSII NGSYNSPFFA TRFREALFHF SALFDMFDTV 120 IPRENEHRMM MEKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29065.1 | 5e-59 | GRAS family protein |