PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI13356.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 21605.4 Da PI: 8.0148 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.9 | 2e-23 | 20 | 126 | 29 | 128 |
NAM 29 eleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgek 118 +++ + i+e +i++++P++Lp ++++ + +fF+k+ k+y++g rk+r + + +W++tgk+++++ +g + g+kk++v+y+ + k+ek MCI13356.1 20 DEFITtIEEDgGICYTHPQHLP-GISQDGSVAHFFHKAIKAYNSGGRKRRRifdqnIGDLRWHKTGKTRPIFL-DGIQRGCKKIMVLYTTpsNGGKAEK 116 333333777768**********.667778899**************999954555444677************.99************6522666778* PP NAM 119 tdWvmheyrl 128 t+Wv+h+y++ MCI13356.1 117 TNWVVHQYHI 126 ********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 192 aa Download sequence |
MSHLLAKVGA GDSEPHPFID EFITTIEEDG GICYTHPQHL PGISQDGSVA HFFHKAIKAY 60 NSGGRKRRRI FDQNIGDLRW HKTGKTRPIF LDGIQRGCKK IMVLYTTPSN GGKAEKTNWV 120 VHQYHIGREE DEKDGEYVIS KIFYQQQQVK LGKKDDQDVP ETSGEASVAR VVDPVTPNFV 180 TPELPCNKKQ CS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 65 | 69 | RKRRR |
2 | 66 | 70 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25580.1 | 3e-80 | NAC family protein |