PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI11957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | WOX | ||||||||
Protein Properties | Length: 155aa MW: 17930 Da PI: 6.6733 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.6 | 7.7e-22 | 21 | 81 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ MCI11957.1 21 RQRWTPTPIQLQILERIFDEgNGTPSKQKIKDITNELgqhgQISETNVYNWFQNRRARSKR 81 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 101.3 | 7e-33 | 20 | 83 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq MCI11957.1 20 SRQRWTPTPIQLQILERIFDEGNGTPSKQKIKDITNELGQHGQISETNVYNWFQNRRARSKRKQ 83 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
RLGNLYCDPL MACSGHKITS RQRWTPTPIQ LQILERIFDE GNGTPSKQKI KDITNELGQH 60 GQISETNVYN WFQNRRARSK RKQSVPTTNQ SEPEPETEVE SPKENKTHEE CDRVQFFENL 120 SPHSVKDMYI QSPDIGFEHL LSKIEVSGSY SSYFL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 75 | 83 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 7e-48 | WOX family protein |