PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI10351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 149aa MW: 17181.7 Da PI: 8.9746 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69 | 1.3e-21 | 24 | 108 | 50 | 128 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatgkdkevlskkgelvglkktLvfykgra..pkgektdWvmheyrl 128 vk++ + ++fF+++ k+y+tg+rk+r+++ + +W++tg++k+v+ +g+++g+kk++v+y +a k+ekt+Wvmh+y+l MCI10351.1 24 GVKQDGNATHFFHRAIKAYNTGTRKRRKIHdqdfgDVRWHKTGRTKPVIL-NGAQKGCKKIMVLYMSSAggGKAEKTNWVMHQYHL 108 455677899******************85555555889************.999***********6554115667*********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 149 aa Download sequence |
MSLLLLLKWM MEFVTLILKT YPVGVKQDGN ATHFFHRAIK AYNTGTRKRR KIHDQDFGDV 60 RWHKTGRTKP VILNGAQKGC KKIMVLYMSS AGGGKAEKTN WVMHQYHLGT EEDENDGEFV 120 ISKVFYQQQH VKLGDIDEQD IPEVTEETI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25580.1 | 7e-61 | NAC family protein |