PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI02543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 101aa MW: 11863.7 Da PI: 10.4091 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 86.4 | 5.4e-27 | 3 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++w+fF++r++++ +g r++r t++gyWk tg+ ++v+s++++++g+k+t+vfy grap+g+ktdW m+ey++ MCI02543.1 3 DKEQWFFFIPRQZSEVRGGRPRRLTTTGYWKXTGSPNHVYSSDNRVIGMKRTMVFYCGRAPNGKKTDWKMNEYKA 77 5679*********************************************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MSDKEQWFFF IPRQZSEVRG GRPRRLTTTG YWKXTGSPNH VYSSDNRVIG MKRTMVFYCG 60 RAPNGKKTDW KMNEYKAIQL DHEASSSNKV EPKVRHVQYV S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.2 | 2e-31 | NAC family protein |