PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH87499.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

NAC

Protein Properties

Length: 193aa MW: 21818.7 Da PI: 10.2986

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH87499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.3	1.7e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+++ +l++ +i+++d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ +++ MCH87499.1 6 LPPGFRFHPTDEELVVHYLKRKAASAPLPV-AIIADIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSdGNQ 103 79**************************.88***********8888999**********************************996778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg+kt+W+mheyrl MCH87499.1 104 KVGVKKALVFYGGKPPKGVKTNWIMHEYRL 133 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
SQHPHLPPGF RFHPTDEELV VHYLKRKAAS APLPVAIIAD IDLYKFDPWE LPSKATFGEQ 60 EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPILTSD GNQKVGVKKA LVFYGGKPPK 120 GVKTNWIMHE YRLITDHNNI NNNHSYNASS KTPLLPSDHP PNNNKKNSLR PLLGRSCGDR 180 TVVLPTKFSV NHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	4e-86	NAC family protein