PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0822s0027.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 166aa MW: 19176.1 Da PI: 11.0029 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.9 | 1.5e-07 | 99 | 116 | 38 | 55 |
TS-HHHHHHHHHHHHHHH CS Homeobox 38 gLterqVkvWFqNrRake 55 +++ ++V++WFqN++a+e Kaladp0822s0027.1.p 99 KIEGKNVFYWFQNHKARE 116 89**************97 PP | |||||||
2 | Wus_type_Homeobox | 49.8 | 8e-17 | 92 | 119 | 37 | 64 |
Wus_type_Homeobox 37 aeLeeyGkiedkNVfyWFQNrkaRerqk 64 +L++yGkie+kNVfyWFQN+kaRe qk Kaladp0822s0027.1.p 92 LQLRRYGKIEGKNVFYWFQNHKARECQK 119 58***********************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 166 aa Download sequence |
MHRGGFSRQQ PILSFNARKP RPLIPKPSTS TFPTHPNSFN QHAHCDTTNF FSTNHHISRI 60 NSCCSNLYSV VVSSSRWNPT PEQLRALEDR ALQLRRYGKI EGKNVFYWFQ NHKARECQKR 120 RRQQLENSSS SPKNDQQQTP HHHQNQQTKD QPAGNSHHQS SSTHN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18010.1 | 3e-23 | WOX family protein |